TAP PHD in Funaria hygrometrica (Transcriptome)

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Funaria

Protein source: Szövényi et al. (2010) Mol Biol Evol 28:803


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

PHD
Alfin-like
Homeobox
zf-TAZ
ARID
zf-MIZ
zf-CCCH
HMG_box
DDT
Myb_DNA-binding
JmjC
JmjN
SWIB

(Domain names are clickable)



List of proteins (117)

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nameClick button to show/hide sequence: Download sequence?
m240lflr_TR10892_c0_g1_i10_15_rc
m240lflr_TR10892_c0_g1_i11_14_rc
m240lflr_TR10892_c0_g1_i12_14_rc
m240lflr_TR10892_c0_g1_i13_14_rc
m240lflr_TR10892_c0_g1_i14_13_rc
m240lflr_TR10892_c0_g1_i15_14_rc
m240lflr_TR10892_c0_g1_i16_14_rc
m240lflr_TR10892_c0_g1_i18_13_rc
m240lflr_TR10892_c0_g1_i19_14_rc
m240lflr_TR10892_c0_g1_i1_15_rc
m240lflr_TR10892_c0_g1_i20_15_rc
m240lflr_TR10892_c0_g1_i21_14_rc
m240lflr_TR10892_c0_g1_i22_14_rc
m240lflr_TR10892_c0_g1_i2_15_rc
m240lflr_TR10892_c0_g1_i4_15_rc
m240lflr_TR10892_c0_g1_i5_14_rc
m240lflr_TR10892_c0_g1_i6_15_rc
m240lflr_TR10892_c0_g1_i7_15_rc
m240lflr_TR10892_c0_g1_i8_13_rc
m240lflr_TR10892_c0_g1_i9_14_rc
m240lflr_TR10898_c1_g1_i1_21_rc
m240lflr_TR10898_c1_g2_i1_18_rc
m240lflr_TR10898_c1_g3_i1_27_rc
m240lflr_TR10898_c1_g3_i2_27_rc
m240lflr_TR10898_c1_g3_i3_20_rc
m240lflr_TR13018_c0_g1_i1_10_rc
m240lflr_TR13018_c0_g1_i2_10_rc
m240lflr_TR15011_c0_g1_i1_2
m240lflr_TR15011_c0_g2_i1_1
m240lflr_TR15011_c0_g3_i1_1
m240lflr_TR15485_c0_g2_i1_10
m240lflr_TR15485_c0_g2_i2_10
m240lflr_TR15485_c0_g2_i3_10
m240lflr_TR15485_c0_g2_i4_10
m240lflr_TR15485_c0_g2_i5_10
m240lflr_TR17157_c0_g1_i1_1
m240lflr_TR18734_c0_g1_i1_4_rc
m240lflr_TR18734_c0_g1_i2_4_rc
m240lflr_TR21312_c0_g1_i1_10_rc
m240lflr_TR21312_c0_g1_i2_10_rc
m240lflr_TR21312_c0_g1_i3_8_rc
m240lflr_TR21337_c0_g1_i1_2
m240lflr_TR21337_c0_g1_i2_4
m240lflr_TR21337_c0_g1_i3_2
m240lflr_TR21337_c0_g1_i4_2
m240lflr_TR21337_c0_g1_i5_4
m240lflr_TR21337_c0_g1_i6_2
m240lflr_TR21777_c0_g1_i1_11_rc
m240lflr_TR21972_c0_g1_i1_4
m240lflr_TR21972_c0_g1_i2_4
m240lflr_TR21972_c0_g1_i3_4
m240lflr_TR21972_c0_g1_i4_4
m240lflr_TR22744_c1_g1_i1_4_rc
m240lflr_TR22744_c2_g1_i1_2_rc
m240lflr_TR22768_c0_g1_i10_10_rc
m240lflr_TR22768_c0_g1_i11_9_rc
m240lflr_TR22768_c0_g1_i14_9_rc
m240lflr_TR22768_c0_g1_i16_10_rc
m240lflr_TR22768_c0_g1_i4_9_rc
m240lflr_TR22768_c0_g1_i9_10_rc
m240lflr_TR22806_c1_g1_i2_4
m240lflr_TR22806_c1_g1_i3_4
m240lflr_TR22806_c1_g2_i1_4
m240lflr_TR22806_c2_g3_i5_24_rc
m240lflr_TR22806_c2_g3_i8_22_rc
m240lflr_TR22806_c2_g3_i9_20_rc
m240lflr_TR25346_c0_g2_i1_3
m240lflr_TR25346_c0_g2_i2_3
m240lflr_TR29524_c2_g1_i5_2
m240lflr_TR29549_c1_g1_i10_3
m240lflr_TR29549_c1_g1_i11_3
m240lflr_TR29549_c1_g1_i12_3
m240lflr_TR29549_c1_g1_i13_2
m240lflr_TR29549_c1_g1_i14_3
m240lflr_TR29549_c1_g1_i1_2
m240lflr_TR29549_c1_g1_i2_3
m240lflr_TR29549_c1_g1_i3_3
m240lflr_TR29549_c1_g1_i4_3
m240lflr_TR29549_c1_g1_i5_2
m240lflr_TR29549_c1_g1_i6_2
m240lflr_TR29549_c1_g1_i7_3
m240lflr_TR29549_c1_g1_i8_3
m240lflr_TR29549_c1_g1_i9_2
m240lflr_TR34587_c0_g1_i1_3
m240lflr_TR38936_c0_g1_i1_1
m240lflr_TR38936_c0_g2_i1_2
m240lflr_TR38936_c0_g2_i2_2
m240lflr_TR4011_c0_g1_i1_1
m240lflr_TR4011_c0_g1_i2_1
m240lflr_TR4011_c0_g1_i3_1
m240lflr_TR4011_c0_g1_i4_1
m240lflr_TR4011_c0_g1_i5_1
m240lflr_TR40529_c0_g1_i1_3
m240lflr_TR40529_c0_g1_i3_2
m240lflr_TR40578_c0_g1_i1_5_rc
m240lflr_TR40578_c0_g1_i2_5_rc
m240lflr_TR40578_c0_g1_i3_5_rc
m240lflr_TR40578_c0_g1_i4_5_rc
m240lflr_TR40578_c0_g1_i5_5_rc
m240lflr_TR40578_c0_g1_i6_5_rc
m240lflr_TR43430_c0_g2_i2_2
m240lflr_TR46836_c0_g1_i1_5
m240lflr_TR46836_c0_g1_i2_5
m240lflr_TR46836_c0_g1_i3_6
m240lflr_TR48714_c0_g1_i1_22_rc
m240lflr_TR5638_c0_g1_i1_15_rc
m240lflr_TR5638_c0_g2_i1_16_rc
m240lflr_TR6913_c0_g1_i1_10_rc
m240lflr_TR7467_c0_g1_i1_2_rc
m240lflr_TR8162_c0_g1_i1_2
m240lflr_TR8162_c0_g2_i1_2
m240lflr_TR8310_c0_g1_i1_4
m240lflr_TR8310_c0_g1_i2_4
m240lflr_TR8472_c0_g1_i1_3_rc
m240lflr_TR8472_c0_g2_i1_4_rc
m240lflr_TR981_c1_g1_i1_6
m240lflr_TR981_c1_g1_i2_5
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum